Notebooks

Visualization

I wrote few simple codes to create decent plots using python.
LearnFree (Director). (2016, October 5). Beginning Graphic Design: Color [Video recording].
Information is beautiful
Muth, L. C. Your Friendly Guide to Colors in Data Visualisation. 2018, Her Blog
The Elements of Visual Grammar: A Designer's Guide for Writers, Scholars, and Professionals by Angela Riechers

Software Tools

Inkscape explained by Logos by Nick
Inkscape tutorials by TJ Free
Inkscape tutorial for beginners (really good)
cpt-city: An archive of color gradients: Got this link from Hacker News when I posted a Nature Communication paper The misuse of colour in science communication there. This webpage contains color gradient files, and importing them in matplotlib is possible using packages like getcpt-master.
Fundamentals of Data Visualization
Palettable: Useful Python package. Contains an extensive set of diverging, sequential, and qualitative colormaps. Very useful.
cmasher: Useful Python package. Contains some new colormaps; I don't like them that much but they are interesting.
BioRender
SciDraw
Servier Medical ART
Canva
Figma
Gephi
Plotly
Veusz 2D
Data to Viz
HiGlass
HiPlot
Gosling
ggcoverage
WashU Epigenome Browser
Websites for drawing flowcharts etc. from text